Institute of Population Genetics PoPoolation DB Institute of Population Genetics University of Veterinary Medicine Vienna
 
Search page
Select input option
Query by region Query by Gene Query by Fasta sequence Query by Gene GTF
Enter Chromosome region
  
Chromosome : 
Start : 
End : 
* max 100 KB region. 
Enter Gene symbol OR Gene name
  
Enter search term : 
* Only 1 gene allowed
Copy paste or upload Fasta sequence
Paste fasta sequence: 
* max 100 KB sequence AND max 1 sequence
* First line must be FASTA header starting with > symbol
Example: >seq1
OR upload fasta file : 
* max 100 KB sequence AND max 1 sequence
* First line must be FASTA header starting with > symbol
Example: >seq1
Upload GTF file
Upload GTF file : 
* max 100 KB region AND max 1 entry.
Select population ID : 
 
Select reference genome : 
D. melanogaster (5.18)
 
Retrieve:
 Pi
 Theta
 D
 Only Polymorphism
Enter flanking regions
5 prime : 
3 prime : 
Advanced parameters
Minimum count : 
Minimum quality score : 
Minimum coverage : 
Maximum coverage : 
Minimum covered fraction : 
 
 
Window size : 
Step size : 
 
 
      

Home  |  Contact us  |  Help